PUBLICATIONS

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In press

Published

2023

doughty2022global
X. Liang, D. Wang, Q. Ye, J. Zhang, M. Liu, H. Liu, K. Yu, Y. Wang, E. Hou, B. Zhong, L. Xu, T. Lv, S. Peng, H. Lu, P. Sicard, A. Anav, D. S. Ellsworth. 2023. Stomatal responses of terrestrial plants to global change. Nature Communications. 14(1): 2188 DOI PDF
@article{liang2023stomatal,
    author = {Liang, X and Wang, D and Ye, Q and Zhang, J. and Liu, M and Liu, H and Yu, K and Wang, Y and Hou, E and Zhong, B and Xu, L and Lv, T and Peng, S and Lu, H and Sicard, P and Anav, A and Ellsworth, D S},
    year = {2023},
    title = {Stomatal responses of terrestrial plants to global change},
    journal = {Nature Communications},
    volume = {14},
    number = {1},
    pages = {2188}
}
wang2023modeling
Y. Wang, R. K. Braghiere, M. Longo, A. J. Norton, P. Köhler, R. Doughty, Y. Yin, A. A. Bloom, and C. Frankenberg. Modeling Global Vegetation Gross Primary Productivity, Transpiration and Hyperspectral Canopy Radiative Transfer Simultaneously Using a Next Generation Land Surface Model—CliMA Land. Journal of Advances in Modeling Earth Systems. 15(3): e2021MS002964. DOI PDF SI CODE
@article{wang2023modeling,
    author = {Wang, Y. and Braghiere, R. K. and Longo, M. and Norton, A. J. and K{\"o}hler, P. and Doughty, R. and Yin, Y. and Bloom, A. A. and Frankenberg, C.},
    year = {2023},
    title = {Modeling Global Vegetation Gross Primary Productivity, Transpiration and Hyperspectral Canopy Radiative Transfer Simultaneously Using a Next Generation Land Surface Model---CliMA Land},
    journal = {Journal of Advances in Modeling Earth Systems},
    volume = {15},
    number = {3},
    pages = {e2021MS002964}
}

2022

wang2022common
Y. Wang, and C. Frankenberg. Technical note: Common ambiguities in plant hydraulics. Biogeosciences. 19(19): 4705-4714. DOI PDF CODE
@article{wang2022common,
    author = {Wang, Y. and Frankenberg, C.},
    year = {2022},
    title = {Technical note: Common ambiguities in plant hydraulics},
    journal = {Biogeosciences},
    volume = {19},
    number = {19},
    pages = {4705--4714}
}
wang2022griddingmachine
Y. Wang, P. Köhler, R. K. Braghiere, M. Longo, R. Doughty, A. A. Bloom, and C. Frankenberg. 2022. GriddingMachine, a database and software for Earth system modeling at global and regional scales. Scientific Data. 9: 258. DOI PDF CODE
@article{wang2022griddingmachine,
    author = {Wang, Yujie and K{\"o}hler, Philipp and Braghiere, Renato K. and Longo, Marcos and Doughty, Russell and Bloom, A. Anthony and Frankenberg, Christian},
    year = {2022},
    title = {GriddingMachine, a database and software for {Earth} system modeling at global and regional scales},
    journal = {Scientific Data},
    volume = {9},
    pages = {258}
}
doughty2022global
R. Doughty, T. Kurosu, N. Parazoo, P. Köhler, Y. Wang, Y. Sun, C. Frankenberg. 2022. Global GOSAT, OCO-2 and OCO-3 solar induced chlorophyll fluorescence datasets. Earth System Science Data. 14(4): 1513-1529. DOI PDF
@article{doughty2022global,
    author = {Doughty, R. and Kurosu, T. P. and Parazoo, N. and K{\"o}hler, P. and Wang, Y. and Sun, Y. and Frankenberg, C.},
    year = {2022},
    title = {Global GOSAT, OCO-2, and OCO-3 solar-induced chlorophyll fluorescence datasets},
    journal = {Earth System Science Data},
    volume = {14},
    number = {4},
    pages = {1513--1529}
}
wang2022impact
Y. Wang, C. Frankenberg. 2022. On the impact of canopy model complexity on simulated carbon, water, and solar-induced chlorophyll fluorescence fluxes. Biogeosciences. 19(1): 29-45. DOI PDF CODE
@article{wang2022impact,
    author = {Wang, Y. and Frankenberg, C.},
    year = {2022},
    title = {On the impact of canopy model complexity on simulated carbon, water, and solar-induced chlorophyll fluorescence fluxes},
    journal = {Biogeosciences},
    volume = {19},
    number = {1},
    pages = {29--45}
}

2021

wang2021testing
Y. Wang, P. Köhler, L. He, R. K. Braghiere, R. Doughty, J. Wood, C. Frankenberg. 2021. Testing stomatal models at the stand level in deciduous angiosperm and evergreen gymnosperm forests using CliMA Land (v0.1). Geoscientific Model Development. 14(11): 6741-6763. DOI PDF SI CODE
@article{wang2021testing,
    author = {Wang, Y. and K{\"o}hler, P. and He, L. and Doughty, R. and Braghiere, R. K. and Wood, J. D. and Frankenberg, C.},
    year = {2021},
    title = {Testing stomatal models at the stand level in deciduous angiosperm and evergreen gymnosperm forests using CliMA Land (v0.1)},
    journal = {Geoscientific Model Development},
    volume = {14},
    number = {11},
    pages = {6741--6763}
}
konings2021detecting
A. G. Konings, S. S. Saatchi, C. Frankenberg, M. Keller, V. Leshyk, W. R. L. Anderegg, V. Humphrey, A. M. Matheny, A. Trugman, L. Sack, E. Agee, M. L. Barnes, O. Binks, K. Cawse-Nicholson, B. O. Christoffersen, D. Entekhabi, P. Gentine, N. M. Holtzman, G. G. Katul, Y. Liu, M. Longo, J. Martinez-Vilalta, N. McDowell, P. Meir, M. Mencuccini, A. Mrad, K. A. Novick, R. S. Oliveira, P. Siqueira, S. C. Steele-Dunne, D. R. Thompson, Y. Wang, R. Wehr, J. D. Wood, X. Xu, P. A. Zuidema. 2021. Detecting forest response to droughts with global observations of vegetation water content. Global Change Biology. 27(23): 6005-6024. DOI PDF SI
@article{konings2021detecting,
    author = {Konings, Alexandra G and Saatchi, Sassan S and Frankenberg, Christian and Keller, Michael and Leshyk, Victor and Anderegg, William RL and Humphrey, Vincent and Matheny, Ashley M and Trugman, Anna and Sack, Lawren and Agee, Elizabeth and Barnes, Mallory L. and Binks, Oliver and Cawse-Nicholson, Kerry and Christoffersen, Bradley O. and Entekhabi, Dara and Gentine, Pierre and Holtzman, Nataniel M. and Katul, Gabriel G. and Liu, Yanlan and Longo, Marcos and Martinez-Vilalta, Jordi and McDowell, Nate and Meir, Patrick and Mencuccini, Maurizio and Mrad, Assaad and Novick, Kimberly A. and Oliveira, Rafael S. and Siqueira, Paul and Steele-Dunne, Susan C. and Thompson, David R. and Wang, Yujie and Wehr, Richard and Wood, Jeffrey D. and Xu, Xiangtao and Zuidema, Pieter A.},
    year = {2021},
    title = {Detecting forest response to droughts with global observations of vegetation water content},
    journal = {Global Change Biology},
    volume = {27},
    number = {23},
    pages = {6005--6024}
}
kohler2021mineral
P. Köhler, W. W. Fischer, G. R. Rossman, J. P. Grotzinger, R. Doughty, Y. Wang, Y. Yin, C. Frankenberg. 2021. Mineral luminescence observed from space. Geophysical Research Letters. 48(19): e2021GL095227. DOI PDF
@article{kohler2021mineral,
    author = {K{\"o}hler, Philipp and Fischer, Woodward W and Rossman, George R and Grotzinger, John P and Doughty, Russell and Wang, Yujie and Yin, Yi and Frankenberg, Christian},
    year = {2021},
    title = {Mineral luminescence observed from space},
    journal = {Geophysical Research Letters},
    volume = {48},
    number = {19},
    pages = {e2021GL095227},
    publisher = {Wiley Online Library}
}
braghiere2021accounting
R. K. Braghiere, Y. Wang, R. Doughty, D. Souza, T. Magney, J. Widlowski, M. Longo, A. Bloom, J. Worden, P. Gentine, and C. Frankenberg. 2021. Accounting for canopy structure improves hyperspectral radiative transfer and sun-induced chlorophyll fluorescence representations in a new generation Earth System model. Remote Sensing of Environment. 261: 112497. DOI PDF SI CODE
@article{braghiere2021accounting,
    author = {Braghiere, Renato K and Wang, Yujie and Doughty, Russell and Sousa, Daniel and Magney, Troy and Widlowski, Jean-Luc and Longo, Marcos and Bloom, A Anthony and Worden, John and Gentine, Pierre and Frankenberg, Christian},
    year = {2021},
    title = {Accounting for canopy structure improves hyperspectral radiative transfer and sun-induced chlorophyll fluorescence representations in a new generation Earth System model},
    journal = {Remote Sensing of Environment},
    volume = {261},
    pages = {112497}
}
potkay2021coupled
A. Potkay, A. T. Trugman, Y. Wang, M. D. Venturas, W. R. L. Anderegg, C. Mattos, and Y. Fan. 2021. Coupled whole-tree optimality and xylem-hydraulics explain dynamic biomass partitioning. New Phytologist. 230(6): 2226-2245. DOI PDF SI
@article{potkay2021coupled,
    author = {Potkay, Aaron and Trugman, Anna T and Wang, Yujie and Venturas, Martin D and Anderegg, William RL and Mattos, Caio RC and Fan, Ying},
    year = {2021},
    title = {Coupled whole-tree optimality and xylem-hydraulics explain dynamic biomass partitioning},
    journal = {New Phytologist},
    volume = {230},
    number = {6},
    pages = {2226--2245}
}
wang2021optimization
Y. Wang, W. R. L. Anderegg, M. D. Venturas, A. T. Trugman, K. Yu, and C. Frankenberg. 2021. Optimization theory explains nighttime stomatal responses. New Phytologist. 230(4): 1550-1561. DOI PDF SI CODE
@article{wang2021optimization,
    author = {Wang, Yujie and Anderegg, William RL and Venturas, Martin D and Trugman, Anna T and Yu, Kailiang and Frankenberg, Christian},
    year = {2021},
    title = {Optimization theory explains nighttime stomatal responses},
    journal = {New Phytologist},
    volume = {230},
    number = {4},
    pages = {1550--1561}
}

2020

wang2020theoretical
Y. Wang, J. S. Sperry, W. R. L. Anderegg, M. D. Venturas, and A. T. Trugman. 2020. Tansley Review: A theoretical and empirical assessment of stomatal optimization modeling. New Phytologist. 227(2): 311–325. DOI PDF SI CODE
@article{wang2020theoretical,
    author = {Wang, Yujie and Sperry, John S. and Anderegg, William R. L. and Venturas, Martin D. and Trugman, Anna T.},
    year = {2020},
    title = {A theoretical and empirical assessment of stomatal optimization modeling},
    journal = {New Phytologist},
    volume = {227},
    number = {2},
    pages = {311--325}
}

2019

sperry2019impact
J. S. Sperry, M. D. Venturas, H. N. Todd, A. T. Trugman, W. R. L. Anderegg, Y. Wang, and X. Tai. 2019. The impact of rising CO₂ and acclimation on theresponse of US forests to global warming. Proceedings of the National Academy of Sciences of the United States of America. 116(51): 25734–25744. DOI PDF SI
@article{sperry2019impact,
    author = {Sperry, John S. and Venturas, Martin D. and Todd, Henry N. and Trugman, Anna T. and Anderegg, William R. L. and Wang, Yujie and Tai, Xiaonan},
    year = {2019},
    title = {The impact of rising {CO}$_{2}$ and acclimation on the response of {US} forests to global warming},
    journal = {Proceedings of the National Academy of Sciences},
    volume = {116},
    number = {51},
    pages = {25734--25744}
}
trugman2019leveraging
A. T. Trugman, L. D. L. Anderegg, J. S. Sperry, Y. Wang, M. D. Venturas, and W. R. L. Anderegg. 2019. Leveraging plant hydraulics to yield predictive and dynamic plant leaf allocation in vegetation models with climate change. Global Change Biology. 25: 4008–4021. DOI PDF SI
@article{trugman2019leveraging,
    author = {Trugman, Anna T. and Anderegg, L. D. L. and Sperry, J. S. and Wang, Yujie and Venturas, M. and Anderegg, W. R. L.},
    year = {2019},
    title = {Leveraging plant hydraulics to yield predictive and dynamic plant leaf allocation in vegetation models with climate change},
    journal = {Global Change Biology},
    volume = {25},
    number = {12},
    pages = {4008--4021}
}
wang2019stomatal
Y. Wang, J. S. Sperry, M. D. Venturas, A. T. Trugman, D. D. Love, and W. R. L. Anderegg. 2019. The stomatal response to rising CO₂ concentration and drought is predicted by a hydraulic trait-based optimization model. Tree Physiology. 39(8): 1416–1427. DOI PDF SI CODE
@article{wang2019stomatal,
    author = {Wang, Yujie and Sperry, John S. and Venturas, Martin D. and Trugman, Anna T. and Love, David M. and Anderegg, William R. L.},
    year = {2019},
    title = {The stomatal response to rising {CO}$_{2}$ concentration and drought is predicted by a hydraulic trait-based optimization model},
    journal = {Tree Physiology},
    volume = {39},
    number = {8},
    pages = {1416--1427}
}
yu2019phylogenetic
K. Yu, G. R. Goldsmith, Y. Wang, and W. R. L. Anderegg. 2019. Phylogenetic and biogeographic controls of plant nighttime stomatal conductance. New Phytologist. 222(4): 1778–1788. DOI PDF SI
@article{yu2019phylogenetic,
    author = {Yu, Kailiang and Goldsmith, Gregory R. and Wang, Yujie and Anderegg, William R. L.},
    year = {2019},
    title = {Phylogenetic and biogeographic controls of plant nighttime stomatal conductance},
    journal = {New Phytologist},
    volume = {222},
    number = {4},
    pages = {1778--1788}
}
love2019dependence
D. M. Love, M. D. Venturas, J. S. Sperry, P. D. Brooks, J. L. Pettit, Y. Wang, and W. R. L. Anderegg. 2018. Dependence of aspen stands on a subsurface water subsidy: Implications for climate change impacts. Water Resource Research. 55(3): 1833–1848. DOI PDF SI
@article{love2019dependence,
    author = {Love, D. M. and Venturas, M. D. and Sperry, J. S. and Brooks, P. D. and Pettit, Joseph L. and Wang, Yujie and Anderegg, W. R. L. and Tai, X. and Mackay, D. S.},
    year = {2019},
    title = {Dependence of aspen stands on a subsurface water subsidy: {Implications} for climate change impacts},
    journal = {Water Resources Research},
    volume = {55},
    number = {3},
    pages = {1833--1848}
}
du2019nano
G. Du, F. Feng, Y. Wang, and M. T. Tyree. 2019. Do nano-particles cause recalcitrant vulnerability curves in Robinia? Testing with a four-cuvette Cochard rotor and with water extraction curves. Tree Physiology. 39(1): 156–165. DOI PDF
@article{du2019nano,
    author = {Du, Guangyuan and Feng, Feng and Wang, Yujie and Tyree, Melvin T.},
    year = {2018},
    title = {Do nano-particles cause recalcitrant vulnerability curves in \textit{Robinia}? {T}esting with a four-cuvette {Cochard} rotor and with water extraction curves},
    journal = {Tree Physiology},
    volume = {39},
    number = {1},
    pages = {156--165}
}

2018

venturas2018stomatal
M. D. Venturas, J. S. Sperry, D. M. Love, E. H. Frehner, M. G. Allred, Y. Wang, and W. R. L. Anderegg. 2018. A stomatal control model based on optimization of carbon gain versus hydraulic risk predicts aspen sapling responses to drought. New Phytologist. 220(3): 836–850. DOI PDF SI CODE
@article{venturas2018stomatal,
    author = {Venturas, Martin D. and Sperry, John S. and Love, David M. and Frehner, Ethan H. and Allred, Michael G. and Wang, Yujie and Anderegg, William R. L.},
    year = {2018},
    title = {A stomatal control model based on optimization of carbon gain versus hydraulic risk predicts aspen sapling responses to drought},
    journal = {New Phytologist},
    volume = {220},
    number = {3},
    pages = {836--850}
}

2017

sperry2017predicting
J. S. Sperry, M. D. Venturas, W. R. L. Anderegg, M. Mencuccini, D. S. Mackay, Y. Wang, and D. M. Love. 2017. Predicting stomatal responses to the environment from the optimization of photosynthetic gain and hydraulic cost. Plant Cell & Environment. 40(6): 816–830. DOI PDF SI CODE
@article{sperry2017predicting,
    author = {Sperry, John S. and Venturas, Martin D. and Anderegg, William R. L. and Mencuccini, Maurizio and Mackay, D. Scott and Wang, Yujie and Love, David M.},
    year = {2017},
    title = {Predicting stomatal responses to the environment from the optimization of photosynthetic gain and hydraulic cost},
    journal = {Plant, Cell \& Environment},
    volume = {40},
    number = {6},
    pages = {816--830}
}

2016

sperry2016pragmatic
J. S. Sperry, Y. Wang, B. T. Wolfe, D. S. Mackay, W. R. L. Anderegg, N. G. McDowell, and W. T. Pockman. 2016. Pragmatic hydraulic theory predicts stomatal responses to climatic water deficits. New Phytologist. 212(3): 577–589. DOI PDF SI CODE
@article{sperry2016pragmatic,
    author = {Sperry, John S. and Wang, Yujie and Wolfe, Brett T. and Mackay, D. Scott and Anderegg, William R. L. and McDowell, Nate G. and Pockman, William T.},
    year = {2016},
    title = {Pragmatic hydraulic theory predicts stomatal responses to climatic water deficits},
    journal = {New Phytologist},
    volume = {212},
    number = {3},
    pages = {577--589}
}

2015

wang2015stem
Y. Wang, J. Liu, and M. T. Tyree. 2015. Stem hydraulic conductivity depends on the pressure at which it is measured and how this dependence can be used to assess the tempo of bubble pressurization in recently cavitated vessels. Plant Physiology. 169(4): 2597–2607. DOI PDF SI CODE
@article{wang2015stem,
    author = {Wang, Yujie and Liu, Jinyu and Tyree, Melvin T.},
    year = {2015},
    title = {Stem hydraulic conductivity depends on the pressure at which it is measured and how this dependence can be used to assess the tempo of bubble pressurization in recently cavitated vessels},
    journal = {Plant Physiology},
    volume = {169},
    number = {4},
    pages = {2597--2607}
}
wang2015studies
Y. Wang, R. Pan, and M. T. Tyree. 2015. Studies on the tempo of bubble formation in recently cavitated vessels: A model to predict the pressure of air bubbles. Plant Physiology. 168(2): 521–531. DOI PDF SI CODE
@article{wang2015studies,
    author = {Wang, Yujie and Pan, Ruihua and Tyree, Melvin T.},
    year = {2015},
    title = {Studies on the tempo of bubble formation in recently cavitated vessels: {A} model to predict the pressure of air bubbles},
    journal = {Plant Physiology},
    volume = {168},
    number = {2},
    pages = {521--531}
}

2014

wang2014improved
Y. Wang, R. Burlett, F. Feng, and M. T. Tyree. 2014. Improved precision of hydraulic conductance measurements using a Cochard rotor in two different centrifuges. Journal of Plant Hydraulics. 1: e-0007. DOI PDF CODE
@article{wang2014improved,
    author = {Wang, Yujie and Burlett, R{\'e}gis and Feng, Feng and Tyree, Melvin T.},
    year = {2014},
    title = {Improved precision of hydraulic conductance measurements using a {Cochard} rotor in two different centrifuges},
    journal = {Journal of Plant Hydraulics},
    volume = {1},
    pages = {e007}
}

2012

liu2012different
J. Liu, P. Fu, Y. Wang, and K. Cao. 2012. Different drought-adaptation strategies as characterized by hydraulic and water-relations traits of evergreen and deciduous figs in a tropical karst forest. Plant Science Journal. 30(5): 484-493. DOI PDF
@article{liu2012different,
    author = {Liu, Jinyu and Fu, Peili and Wang, Yujie and Cao, Kunfang},
    year = {2012},
    title = {Different drought-adaptation strategies as characterized by hydraulic and water-relations traits of evergreen and deciduous figs in a tropical karst forest},
    journal = {Plant Science Journal},
    volume = {30},
    number = {5},
    pages = {484--493}
}